The transfer of chirality from one set of molecules to another is fundamental for applications in chiral technology and has likely played a crucial role for establishing homochirality on earth. Here we show that an intrinsically chiral gold cluster can transfer its handedness to an achiral molecule adsorbed on its surface. Solutions of chiral Au38(2-PET)24 (2-PET=2-phenylethylthiolate) cluster enantiomers show strong vibrational circular dichroism (VCD) signals in vibrations of the achiral adsorbate. Density functional theory (DFT) calculations reveal that 2-PET molecules adopt a chiral conformation. Chirality transfer from the cluster to the achiral adsorbate is responsible for the preference of one of the two mirror images. Intermolecular interactions between the adsorbed molecules on the crowded cluster surface seem to play a dominant role for the phenomena. Such chirality transfer from metals to adsorbates likely plays an important role in heterogeneous enantioselective catalysis.
  • Pd2Au36(SR)24 cluster: structure studies
    B. Zhang, S. Kaziz, H. Li, D. Wodka, S. Malola, O.V. Safonova, M. Nachtegaal, C. Mazet, I. Dolamic, J. Llorca, E. Kalenius, L.M. Lawson Daku, H. Häkkinen, T. Buergi and N. Barrabes
    Nanoscale, 7 (40) (2015), p17012-17019
    DOI:10.1039/C5NR04324G | unige:75923 | Abstract | Article HTML | Article PDF | Supporting Info
The location of the Pd atoms in Pd2Au36(SC2H4Ph)24, is studied both experimentally and theoretically. X-ray photoelectron spectroscopy (XPS) indicates oxidized Pd atoms. Palladium K-edge extended X-ray absorption fine-structure (EXAFS) data clearly show Pd-S bonds, which is supported by far infrared spectroscopy. By comparing theoretical EXAFS spectra in R space and circular dichroism spectra of the staple, surface and core doped structures with experimental spectra.
  • Discriminability of tryptophan containing dipeptides using quantum control
    S. Afonina, O. Nenadl, A. Rondi, L. Bonacina, J. Extermann, D. Kiselev, I. Dolamic, T. Burgi and J.P. Wolf
    Applied Physics B, 111 (4) (2013), p541-549
    DOI:10.1007/s00340-013-5370-0 | unige:37054 | Abstract | Article HTML | Article PDF
We show that the coherent manipulation of molecular wavepackets in the excited states of trp-containing dipeptides allows efficient discrimination among them. Optimal dynamic discrimination fails, however, for some dipeptide couples. When considering the limited spectral resources at play (3 nm bandwidth at 266 nm), we discuss the concept of discriminability, which appears uncorrelated to both static spectra and relaxation lifetimes.
 
The far infrared spectra of a series of well-defined gold clusters covered by 2-phenylethanetiolate were studied. The spectra of the cluster are different but the differences are subtle. The Au-S stretching vibrations give rise to bands around 300 cm-1 and below. The relative intensity of these bands changes but they shift only slightly for different clusters. A low-frequency band was identified that is sensitive to the conformation (trans / gauche) of the 2-phenylethanetiolate ligand.
  
  • On the flexibility of the gold-thiolate interface: Racemization of the Au40(SR)24 cluster
    B. Varnholt, I. Dolamic, S. Knoppe and T. Bürgi
    Nanoscale, 5 (2013), p9568-9571
    DOI:10.1039/c3nr03389a | unige:30154 | Abstract | Article PDF
The two enantiomers of the Au40(2-PET)24 cluster were collected using HPLC and analyzed by MALDI-TOF mass spectrometry, UV-vis- and CD-spectroscopy. The flexibility of the cluster surface allows racemization of the intrinsically chiral cluster at elevated temperatures (80 – 130 °C) which was monitored following the optical activity. The determined activation energy (25 kcal/mol) lies in the range of previously reported values for Au38 nanoclusters whereas the activation entropy deviates significantly from the one in Au38. The latter may indicate that the racemization can take place via different mechanisms.
Thiolate-protected gold nanoparticles and clusters combine size-dependent physical properties with the ability to introduce (bio)chemical functionality within their ligand shell. The engineering of the latter with molecular precision is an important prerequisite for future applications. A key question in this respect concerns the flexibility of the gold – sulfur interface. Here we report the first study on racemization of an intrinsically chiral gold nanocluster, Au38(SCH2CH2Ph)24, which goes along with a drastic rearrangement of its surface involving place exchange of several thiolates. This racemization takes place at modest temperatures (40 – 80 °C) without significant decomposition. The experimentally determined activation energy for the inversion reaction is ca 28 kcal/mol, which is surprisingly low considering the large rearrangement. The activation parameters furthermore indicate that the process occurs without complete Au-S bond breaking.
 
Chirality unveiled: Thiolate-protected Au40(SR)24 clusters were enantioenriched using an HPLC approach. CD spectra show strong mirror-image responses, indicating the intrinsic chirality of a cluster of unknown structure protected with achiral ligands.
  
  • First enantioseparation and circular dichroism spectra of Au38 clusters protected with achiral ligands
    I. Dolamic, S. Knoppe, A. Dass and T. Bürgi
    Nature Communications, 3 (2012), p798
    DOI:10.1038/ncomms1802 | unige:20260 | Abstract
Bestowing chirality to metals is central in fields such as heterogeneous catalysis and modern optics. Although the bulk phase of metals is symmetric, their surfaces can become chiral through adsorption of molecules. Interestingly, even achiral molecules can lead to locally chiral, though globally racemic, surfaces. A similar situation can be obtained for metal particles or clusters. Here we report the first separation of the enantiomers of a gold cluster protected by achiral thiolates, Au38(SCH2CH2Ph)24, achieved by chiral high-performance liquid chromatography. The chirality of the nanocluster arises from the chiral arrangement of the thiolates on its surface, forming 'staple motifs'. The enantiomers show mirror-image circular dichroism responses and large anisotropy factors of up to 4×10−3. Comparison with reported circular dichroism spectra of other Au38 clusters reveals that the influence of the ligand on the chiroptical properties is minor.
  • Size Exclusion Chromatography for Semi-Preparative Scale Separation of Au38(SR)24 and Au40(SR)24 and larger clusters
    S. Knoppe, J. Boudon, I. Dolamic, A. Dass and T. Bürgi
    Analytical Chemistry, 83 (13) (2011), p5056-5061
    DOI:10.1021/ac200789v | unige:16756 | Abstract | Article HTML | Article PDF
 
Size Exclusion Chromatography (SEC) on a semi-preparative scale (10 mg and more) was used to size-select ultrasmall gold nanoclusters (< 2 nm) from polydisperse mixtures. In particular, the ubiquitous byproducts of the etching process towards Au38(SR)24 (SR: thiolate) clusters were separated and gained in high monodispersity (based on mass spectrometry). The isolated fractions were characterized by UV/Vis spectroscopy, MALDI mass spectrometry and electron microscopy. Most notably, the separation of Au38(SR)24 and Au40(SR)24 clusters is demonstrated.
  
The photocatalytic degradation of l-asparagine and l-glutamic acid over Au/TiO2 and TiO2 catalysts was investigated in situ by attenuated total reflection infrared (ATR-IR) in combination with modulation excitation spectroscopy. Oxalate was detected on the catalyst surface, which has not been reported before for degradation of amino acids by studies focusing on intermediates in solution. The ATR-IR spectra provide valuable information on the fate of the nitrogen. Ammonium was detected, in agreement with previous studies. Most importantly, strong signals of cyanide were observed, and this assignment has been corroborated by 15N labeling experiments. Cyanide was not reported before, to the best of our knowledge, for the photocatalytic degradation of amino acids. Cyanide was formed in the presence and the absence of gold particles on the TiO2 surface. The cyanide leads to leaching of gold via Au(CN)2− species that were detected in solution by mass spectrometry.
A combination of in situ attenuated total reflection infrared (ATR-IR) spectroscopy, UV−vis spectroscopy and transmission electron microscopy was used to study the adsorption of thiol-protected gold nanoparticles on TiO2 films and the behavior of the resulting composite films upon UV irradiation. The gold nanoparticles were covered by charged thiols N-acetyl-l-cysteine and l-glutathione and had a mean core diameter of about 1 nm. The TiO2 film was prepared by deposition of a slurry of TiO2 nanoparticles with a particles size of 21 nm. The combination of the two spectroscopic techniques showed that the adsorption of the gold nanoparticles onto the TiO2 films is significantly limited by intrafilm diffusion. Upon illumination the IR spectra revealed the removal of the adsorbed thiolates and the appearance of sulfates. These species were also observed when N-acetyl-l-cysteine adsorbed on TiO2 was illuminated, i.e., in the absence of gold. In the latter case oxalate was observed in large quantity on the TiO2 surface, in contrast to the illumination of the N-acetyl-l-cysteine-protected gold particles. This indicates a different pathway for the decomposition of the adsorbed thiol when adsorbed on the gold or directly on the TiO2 surface. In situ UV−vis spectroscopy also shows the formation of larger particles upon illumination, which is confirmed by transmission electron microscopy.
 
Attenuated total reflection infrared (ATR-IR) spectroscopy in a flow-through cell was used to study the photocatalytic mineralization of malonic acid and succinic acid over P25 TiO2 in situ. The experiments were performed in water at concentrations of 1.5×10−4 mol/L and pH 3.5 at room temperature. Changes on the catalyst surface were observed within a few minutes. The first step in the mineralization of malonic acid is a photo-Kolbe reaction of adsorbed malonate. Part of the resulting C2 species is converted into oxalate and finally into carbon dioxide, and part desorbs from the surface. The branching ratio for the two pathways is 50:50. The mineralization reaction was also observed in the absence of dissolved oxygen, but at a slower rate. In the presence of dissolved 18O2, labeled oxygen was incorporated into the adsorbed oxalate. A dominant pathway in the mineralization of succinic acid involves the transformation to oxalate via malonate. Thus, it is proposed that a favored pathway for dicarboxylic acid mineralization is a photo-Kolbe reaction, followed by oxidation of the carbon-centered radical to a carboxylate, which corresponds to the overall formal shortening of the alkyl chain by one CH2 unit.
The photoassisted mineralization, i.e., conversion to CO2 and water, of malonic acid over P25 TiO2 was investigated by in situ attenuated total reflection infrared (ATR-IR) spectroscopy in a small volume flow-through cell. Reassignment of the vibrational bands of adsorbed malonic acid, assisted by deuterium labeling, reveals two dissimilar carboxylate groups within the molecule. This indicates adsorption via both carboxylate groups, one in a bridging or bidentate and the other in monodentate coordination. During irradiation the coverage of malonic acid strongly decreases, and oxalate is observed on the surface in at least two different adsorption modes. The major oxalate species observed during irradiation is characterized by monodentate coordination of both carboxylate groups. In the dark, however, part of these species adopts another adsorption mode, possibly interacting only with one carboxylate group. During band gap illumination a large fraction of the surface is not covered by acid. Oxalate is a major intermediate in the mineralization of malonic acid. However, the observed transient kinetics of adsorbed malonic and oxalic acid indicates additional pathways not involving oxalate. The rate constant for oxalate decomposition is slightly larger than the one for oxalate formation from malonic acid. As the oxalate is desorbing slowly from the surface its concentration in the liquid phase is small, despite the fact that it is a major intermediate in the mineralization of malonic acid.
  
  • Probing Chiral Nanoparticles and Surfaces by Infrared Spectroscopy
    C. Gautier, M. Bieri, I. Dolamic, S. Angeloni, J. Boudon and T. Bürgi
    Chimia, 60 (11) (2006), p777-782
    DOI:10.2533/chimia.2006.777 | unige:14749
Chiral metal surfaces and nanoparticles have the potential to be used for the selective production, the resolution and the detection of enantiomers of a chiral compound, which renders them highly attractive in view of the tremendous consequences of homochirality on earth. Their capability to distinguish between enantiomers of a chemical compound relies on their structure and the ability to form intermolecular interactions. However, molecular-level understanding of the interactions that are at the origin of enantiodiscrimination is lagging behind due to the lack of powerful experimental techniques that are able to spot these interactions selectively with high sensitivity. In this article two techniques based on infrared spectroscopy are presented that are able to selectively target the chiral properties of nanoparticles and interfaces. These are the combination of attenuated total reflection infrared (ATR-IR) with modulation excitation spectroscopy (MES) to probe enantiodiscriminating interactions at chiral solid-liquid interfaces and vibrational circular dichroism (VCD), which is used to probe the structure of chirally modified metal nanoparticles.

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